BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D07LP1|AL428541
(601 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 559 e-159
3x_Contig1530 551 e-157
3x_Contig991 124 1e-28
>3x_Contig1461
Length = 5478
Score = 559 bits (274), Expect = e-159
Identities = 318/338 (94%)
Strand = Plus / Plus
Query: 1 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4521 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 4580
Query: 61 aacgctgaatatgtgatgttcacttaactccaaggcacaaaaactggtaaatcaacatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4581 aacgctgaatatgtgatgttcacttaactccaaggcacaaaaactggtaaatcaacatac 4640
Query: 121 tctatactctgtccttatgtcttaaaaagtagtttaacaaaaaactagaataaaataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4641 tctatactctgtccttatgtcttaaaaagtagtttaacaaaaaactagaataaaataata 4700
Query: 181 tatccagcgacaaaaaaaaaaaaaaaaaaaaaaaaaaacaaatttcgttgcgttgttgtt 240
||||||||||||||||||||||||||||||||||||||||||| ||| |||| || || |
Sbjct: 4701 tatccagcgacaaaaaaaaaaaaaaaaaaaaaaaaaaacaaatgtcgatgcgatgatgat 4760
Query: 241 awtwttwttctaataatcaaatawtcaawtmctttttwgggaaagaaaacaacaaaaagt 300
| | | ||||||||||||||| |||| | |||| | | ||||||||||||||||||||
Sbjct: 4761 aataataatctaataatcaaataatcaaatactttatagagaaagaaaacaacaaaaagt 4820
Query: 301 ctcrggtggcttcaaaagggaacgaggaaagtggtttt 338
||| ||| |||||||||| |||||| ||||||||||||
Sbjct: 4821 ctcaggtagcttcaaaagagaacgaagaaagtggtttt 4858
>3x_Contig1530
Length = 6216
Score = 551 bits (270), Expect = e-157
Identities = 317/338 (93%)
Strand = Plus / Minus
Query: 1 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 5811
Query: 61 aacgctgaatatgtgatgttcacttaactccaaggcacaaaaactggtaaatcaacatac 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aacgctgaatatgtgattttcacttaactccaaggcacaaaaactggtaaatcaacatac 5751
Query: 121 tctatactctgtccttatgtcttaaaaagtagtttaacaaaaaactagaataaaataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5750 tctatactctgtccttatgtcttaaaaagtagtttaacaaaaaactagaataaaataata 5691
Query: 181 tatccagcgacaaaaaaaaaaaaaaaaaaaaaaaaaaacaaatttcgttgcgttgttgtt 240
||||||||||||||||||||||||||||||||||||||||||| ||| |||| || || |
Sbjct: 5690 tatccagcgacaaaaaaaaaaaaaaaaaaaaaaaaaaacaaatgtcgatgcgatgatgat 5631
Query: 241 awtwttwttctaataatcaaatawtcaawtmctttttwgggaaagaaaacaacaaaaagt 300
| | | ||||||||||||||| |||| | |||| | | ||||||||||||||||||||
Sbjct: 5630 aataataatctaataatcaaataatcaaatactttatagagaaagaaaacaacaaaaagt 5571
Query: 301 ctcrggtggcttcaaaagggaacgaggaaagtggtttt 338
||| ||| |||||||||| |||||| ||||||||||||
Sbjct: 5570 ctcaggtagcttcaaaagagaacgaagaaagtggtttt 5533
Score = 131 bits (64), Expect = 2e-30
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 508 ccctgttgttctttttkgtcgtttacaawtgwtttttccttgcgcaaaatgamattgcaa 567
||||||||| | ||| ||||| ||||| || ||| |||||||||||||||| |||||||
Sbjct: 5363 ccctgttgtacatttaagtcgtatacaaatgatttatccttgcgcaaaatgacattgcaa 5304
Query: 568 ttcgccggcaagcacccaaagcctttccgctaag 601
||||||||||||||||||||||||||||||||||
Sbjct: 5303 ttcgccggcaagcacccaaagcctttccgctaag 5270
>3x_Contig991
Length = 2941
Score = 124 bits (61), Expect = 1e-28
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaacaaaaaatgagctaaaatgaattgaaaagaatctctttttatatgaaggacacacac 498
Query: 61 a 61
|
Sbjct: 499 a 499
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.717 1.34
Gapped
Lambda K H
1.41 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,514
Number of Sequences: 1807
Number of extensions: 26514
Number of successful extensions: 8652
Number of sequences better than 1.0e-20: 3
length of query: 601
length of database: 10,358,551
effective HSP length: 16
effective length of query: 585
effective length of database: 10,329,639
effective search space: 6042838815
effective search space used: 6042838815
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.4 bits)